The pension contribution is ultimately tax free. However, the employee must pay tax, which the pension provider reclaims from the HMRC. It gets added to the employee’s pension fund. Employees contributing to stakeholder schemes can have NI categories A, B, C, or J. You can set up a stakeholder pension deduction in Payroll by following the below steps: - Select the Settings tab. Select Payments & Deductions.
- Select the Deductions tab. Select Create New Deduction.
- Complete as required, the details below:
Deduction Category | Choose Pensions in the drop-down list. | Deduction Type | The pension type Stakeholder Pension appears by default. | Name | If required, change the deduction name. By default, the name appears as Stakeholder Pension. | Description | If required, change the description. By default, the description appears as Government legislated contracted-in pension scheme. | Employee Standard Contribution | This option appears after you choose Pensions from the Deduction Category drop-down list.
There are two options:
- Fixed amount. To contribute a fixed amount each month toward the pension. Enter the amount in the next box
- Percentage of pay. To contribute a percentage of pay each month toward the pension. Enter the percentage in the next box
| Employer Standard Contribution | This option appears after you choose Pensions from the Deduction Category drop-down list.
There are two options:
- Fixed amount. To contribute a fixed amount each month toward the pension. Enter the amount in the next box
- Percentage of pay. To contribute a percentage of pay each month toward the pension. Enter the percentage in the next box
| - Select Save.
Adding the deductionYou add this Pension deduction to your employee when you process a pay run. Removing the deductionDelete the deduction when you next run the payroll. - From the Edit pay screen, look at the Deduction section.
- Select the X to the left of the Stakeholder Pension deduction
The pension deduction is now removed. To view the pension contributions for a historical period, you can check Section 3 of the detailed payroll report. 
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